8 services stop at Kyoto Station. Counting services on the same tracks once, it is a transfer station for 7 lines.
| Line | Previous | Next |
|---|---|---|
| JR Kyoto Line | (terminus) | Nishi-oji |
| Tokaido Shinkansen | Maibara | Shin-Osaka |
| JR Sanin Main Line | (terminus) | Tambaguchi |
| Kintetsu Kyoto Line | (terminus) | Toji |
| JR Biwako Line | Yamashina | Nishi-oji |
| JR Nara Line | (terminus) | Tofukuji |
| K11Kyoto Subway Karasuma Line | Gojo | Kujo |
| JR Sanin Main Line (Kyoto - Tottori) | (terminus) | Umekoji-Kyotonishi |